Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015875913.1_cds_XP_016435941.1_31845
CDS Infomation	[gene=LOC107762128] [db_xref=GeneID:107762128] [protein=DNA mismatch repair protein MSH3 isoform X2] [protein_id=XP_016435941.1] [location=complement(join(117146..117149,117907..118232,118518..119009,119526..119675,121192..121263,121341..121601,122701..122832,122908..123159,123493..123741,123827..123925,126663..126827,127061..127255,128488..129444))] [gbkey=CDS]
Sequence	ATGGGAAAACCAAAACAACAAGTGATTTCCCGCTTCTTTGCACCAAAACCAAAGAACGAA AAAGACCCTTCAACTTCAGCTTCAACCCCTCCCTGTACTCCACCTCCCAAAATTACTGCC ACCGTCACCTTTTCACCTGCAAAACGCCTCAGAAATTCTCAACTCACTTCTCCTCCTCCC ACAAAACACACCAAAATCCCTAAGCTATCACCCCACGTACACAACCCACCCCCTCCTCTT CCTAACCCCACTCTCCACCAGAGGTTCCTGGATAAACTTCTAGAACCATCTACCGACCTT CTGGAACCTTCTAAATGTTATGATATTCAAAACCCCAAGTACACACCATTAGAGCAACAA GTTGTGGAGCTTAAGGCCAAGTACCCAGACATTTTATTGATGATCGAAGTTGGTTATAAG TACAGATTTTTTGGTCAGGATGCAGAAAATGCTGCTAGGGTTTTAGGAATTTATGCACAT ATGGATCACAATTTCTTAACAGCTAGTGTACCGACTTTTCGGCTGAATGTCCACGTAAGG AGGCTGGTGAGTGCAGGATACAAAGTTGGTGTTGTTAAGCAAACGGAGACTGCTGCAATT AAGGCACATGGCTCGAATAAATTGGGCCCTTTTGGCCGTGGGTTATCGGCACTGTACACG AAAGCTACTCTGGAGGCTTCGGAAGATGTAGGGGGTGGAGATGAGGGAGTCGGGTCATGT AATAACTATTTGTGTTGTGTTGTTGAGAAGGGAATGGAGGATGTTGATTTTGGGATTGAG GGTTGTAGGGGGGTTGATGTGAAAATCGGGGTTGTTGGGGTTGAAGTTTCGACCGGAGAT GTTGTTTATGGGGAGTTCAATGATAATTTTATGAGGGTGGGGTTGGAGGCGATGATCCTC AACTTGATGCCAGCTGAATTGCTTGTTGCCAAGCCTATATCTAAGCAGACAGAGAAGCTG CTACTGGCTTATGCTGGACCAGCATCTAATGTTAGGGTGGAGGATGTATCATCAGATCGG TTCAGTGATGGCGGTGCTCTTGCTGAAGTGATGTCTCTATATGAGGGCATGCAGGAACAT TATTTGTCAAATGTCCAAGAAAGGGAAGAGGCTGAAGTGAAAATGCACGAACACAATCGG ATCACAATCCAGGGAATGATGGCAATGCCTGGTCTGGCTATACAAGCATTGGCCTTAATT ATTAGACATCTAAAACAATTTGGTTTGGAAAGAGTTCTGTGCTTGGGAGCTTCATTTCGT CCCTTCTCTTGCAACATGGAGATGACCCTTTCAGCCAATGCACTGCAGCAACTTGAGGTT TTGAAGAATAATTTTGACGGATCCGAATCTGGCTCCTTACTGCATTGTATGAATCAGACA CTTACTGTAATTGGTTCAAGGCTTCTCAGGCACTGGGTGACTCATCCTTTATGTGATAGA AACATGATAGCTGCTCGTCTTGATGCAGTTTCAGAGATTGCAGAATCTATGAAAACTTAT CGAACTTCTTATACTTCTTTCTTAGAGGTGGAAGGTGCTGATGTCACCATTTCGCAACCA GAGATACATCATATAATTTCTTCAGTTCTGTCCACTCTAGGAAGGTCACCAGATATTCAA CGCGGGATTACAAGAATTTTTCACAGAAAAGCTACCGCATCTGAGTTTATTGCAGTCATT CAAGCTATCTTGACTGCTGCAAAACAACTTCAGCAGCTTTGGATAGAAGAGGATAAAAGT ACGAATCTGCAAAGAGAGACCTTGCGCTCAGTACTGTTGAGAAAGTTGATATCAGTTGCC TCATCGTCTACTGTTATTAATGCTGCCGCAAAGCTTTTGTCTGCTTTAAACAAGGAAGCC GCTGACAGACGAGATCTTCACAATTTATTCTTCATTTCGGATGGAAAGTTCCCTGAGGTT GCTGAAGTTACAAGGAGAGTTGAGTTGGCAAATGAGAAGTTAGACTCATTAATTGGTGTG TATCGCAAGCAGCTTCATGTCCGCAATTTGGAGTACATGAGTGTAGCTGGAATTACACAT TTGATAGAGTTGCCTCTAGACACAAAGGTGCCGCCAGATTGGGTCAAAGTGAACAGTACT AAGAAAGCAATACGCTATCATCCACCAGAAGTATTAGTGGCTTTAGATGAATTAGCATTG GCAAATGAGCAGCTCACTGTCGTTTGCCAAGCTGCTTGGAATAAATTTTTAACGAGTTTT GGTGGATACTTTGCTGAGTTCCAAGCAGCTGTGCAAGCCCTGGCTTCACTGGATTGTCTA AATTCTCTTGCCATTCTTTCGAGGAATAAGAATTATGTCCGTCCACTCTTTGTGAAAGAT GATGAGGCTGTTCAGATACATATTTGCTCTGGTCGTCACCCGGTTTTGGAGAGAGTATTA CAAGATAACTTTGTCCCAAATGATACAGATTTGCATGCAGAAAGAGAGTATTGTCAGATT GTTACTGGACCAAATATGGGAGGAAAAAGTTGCTATATTCGCCAAGTTGCTCTTATTGCT TTGATGGCTCAGGTTGGATCCTTTGTTCCAGCGTTCTCTGCAAAACTGCACGTGCTAGAT GGCATATATACTCGCATGGGTGCATCAGACAGTATACAGCAAGGAAGAAGTACATTCTTA GAAGAACTCAGCGAGGCTTCTGATATACTGAAAAAATGCTCAGCCAGCTCGTTGGTTATA CTTGATGAGCTTGGGAGAGGCACCAGTACGCATGATGGCGTAGCAATTGCTTATGCAACA CTTCAGTATCTCCTAGAGCACAAGAAATGCATGATTCTATTTGTCACCCATTACCCTGAA ATTGTCAGTATCAAGAATGAATATCCAGGCTCTGTGGAACCATACCATGTGTCATACCTG ACATCCCAAAGAGATGTGAATGGCGATTTCAAGTCAAATGAGAAGATGGATCTCATCAAT ACTGAAGACATCACCTACCTTTACAAACTTGCACCAGGGGTCTGTGAGAGAAGTTTTGGT TTTAAAGTTGCTCAGCTTGCACAACTGCCGGTTGCGTGTATTCAACGAGCCATTGTAATA GCTGGAAGACTAGAAGCAGCAGTCTCTAACTACACAGTGCAAAATCGAACTAGAAGGAGC TCTTCCATAAGTTATAGCATAGATGGTTGTAAAGAATCTGAACCAGTGGAGTATGTCTTA GAACCTGATTGCTTGTCTGCTGGAAGAGCTGAACGCTTAGATGATATGAGCGAGCTTTAT AGGGAGTTGTTTCTGAACCTAAACTTCGCACTTCTTGAAGAACATGATGATGACAGGAGG CTTCAGTTTCTAATGCAGGCTAGAGGGCTTGCAGCTCAGTTAATAAGTAGGTAA

Peptide Sequence

PEP ID	XP_016435941.1
PEP Infomation	PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Nicotiana tabacum]
Sequence	MGKPKQQVISRFFAPKPKNEKDPSTSASTPPCTPPPKITATVTFSPAKRLRNSQLTSPPP TKHTKIPKLSPHVHNPPPPLPNPTLHQRFLDKLLEPSTDLLEPSKCYDIQNPKYTPLEQQ VVELKAKYPDILLMIEVGYKYRFFGQDAENAARVLGIYAHMDHNFLTASVPTFRLNVHVR RLVSAGYKVGVVKQTETAAIKAHGSNKLGPFGRGLSALYTKATLEASEDVGGGDEGVGSC NNYLCCVVEKGMEDVDFGIEGCRGVDVKIGVVGVEVSTGDVVYGEFNDNFMRVGLEAMIL NLMPAELLVAKPISKQTEKLLLAYAGPASNVRVEDVSSDRFSDGGALAEVMSLYEGMQEH YLSNVQEREEAEVKMHEHNRITIQGMMAMPGLAIQALALIIRHLKQFGLERVLCLGASFR PFSCNMEMTLSANALQQLEVLKNNFDGSESGSLLHCMNQTLTVIGSRLLRHWVTHPLCDR NMIAARLDAVSEIAESMKTYRTSYTSFLEVEGADVTISQPEIHHIISSVLSTLGRSPDIQ RGITRIFHRKATASEFIAVIQAILTAAKQLQQLWIEEDKSTNLQRETLRSVLLRKLISVA SSSTVINAAAKLLSALNKEAADRRDLHNLFFISDGKFPEVAEVTRRVELANEKLDSLIGV YRKQLHVRNLEYMSVAGITHLIELPLDTKVPPDWVKVNSTKKAIRYHPPEVLVALDELAL ANEQLTVVCQAAWNKFLTSFGGYFAEFQAAVQALASLDCLNSLAILSRNKNYVRPLFVKD DEAVQIHICSGRHPVLERVLQDNFVPNDTDLHAEREYCQIVTGPNMGGKSCYIRQVALIA LMAQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSEASDILKKCSASSLVI LDELGRGTSTHDGVAIAYATLQYLLEHKKCMILFVTHYPEIVSIKNEYPGSVEPYHVSYL TSQRDVNGDFKSNEKMDLINTEDITYLYKLAPGVCERSFGFKVAQLAQLPVACIQRAIVI AGRLEAAVSNYTVQNRTRRSSSISYSIDGCKESEPVEYVLEPDCLSAGRAERLDDMSELY RELFLNLNFALLEEHDDDRRLQFLMQARGLAAQLISR

Transcript Sequence

Gene sequence data has not been registered.